因产品创新和工艺创新对知识、技术、技能的投入依赖度存在差异，创新组织方式对两类创新绩效存在不同的影响。以7499家有研发活动制造业企业为参照组，利用双对数回归模型估计江苏省4833家战略性新兴产业产品和工艺创新绩效及其影响因素。结果显示，政府研发补贴对参照组的产品和工艺创新具有显著的直接影响，对目标组的影响都不显著；进一步分析发现，政府对目标组单个企业补贴强度低，没有助其跨过最低“研发投资门槛”。产学研合作对目标组产品创新影响大于参照组，对工艺创新影响小于参照组。政府研发补贴与产学研合作的交叉项对目标组产品创新具有显著影响，对工艺创新的影响不显著。依据实证结论，从研发补贴方式和产学研合作模式选择角度对提高战略性新兴产业产品和工艺创新效率提出几点政策建议。

Innovation organization has a significant impact on innovation performance，because product innovation and process innovation have a difference factor intensities degree of knowledge, technology and skills. Taking 7499 R&D manufacturing enterprises as the reference group, we estimate the innovation performance and its influencing factors of 4833 strategic emerging industrial product and process innovation in Jiangsu province by using the dual logarithm regression model. The Government R & D subsidies have a significant direct impact on the product and process innovation of the reference group, and no significant effect on the target group. Further study found that the individual enterprises subsidies strength of the target group is lower, not to cross the lowest "R&D Investment Threshold". The effect of Industry-University-Research cooperation on product innovation of the target group was greater than that of the reference group, and the effect of the process innovation was less than that of the reference group. The cross terms of government R&D subsidies and Industry-University-Research cooperation has significant effect on the product innovation of the target group, which has no significant effect on the process innovation. Based on the empirical conclusion, the paper puts forward some policy suggestions on the strategic emerging industrial product and process innovation efficiency from the perspective of R&D subsidies and the mode of cooperation.